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| Registros recuperados : 62 | |
| 3. |  | GUTIÉRREZ, L.; LADO, B.; GONZÁLEZ, P.; SILVA, P.; QUINCKE, M. Handling Genotype-By-Environment Interaction in Genomic Selection to Predict New Genotypes and New Environments. [P0814] In: International Plant & Animal Genome, Conference PAG XXIV, "The largest Ag-genomics Meeting in the World San Diego, CA, USA; January 9-13, 2016. [Abstract] .| Biblioteca(s): INIA Las Brujas. |
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| 5. | | PÉREZ, O.; VIEGA, L.; GUTIÉRREZ, L.; CASTRO, M. Post-anthesis water deficit in spring wheat: effects on yield components and relative water content. In: SEMINARIO INTERNACIONAL DE TRIGO, 2014, La Estanzuela, Colonia, UY. GERMÁN, S., et al. (Org.). 1914-2014, un siglo de mejoramiento de trigo en La Estanzuela: un valioso legado para el futuro: resúmenes; posters. La Estanzuela, Colonia, UY: INIA, 2014. p. 41.| Biblioteca(s): INIA La Estanzuela. |
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| 6. | | PÉREZ, O.; VIEGA, L.; GUTIERREZ, L.; CASTRO, M. Post-anthesis water deficit in spring wheat: effects on yield components and relative water content. [Poster]. In: German, S.; Quincke, M.; Vázquez, D.; Castro, M.; Pereyra, S.; Silva, P.; García, A. (Eds.). Seminario Internacional "1914-2014: Un siglo de mejoramiento de trigo en La Estanzuela". Montevideo (UY): INIA, 2018. P.130. (INIA Serie Técnica; 241).| Biblioteca(s): INIA La Estanzuela. |
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| 7. | | PEREYRA, S.; GERMAN, S.; GONZÁLEZ, S.N.; CASTRO, A.; GAMBA, F.; GUTIERREZ, L. Advances in the integrated management of leaf blotches in Uruguay. In: International Workshop on Barley Leaf Diseases , 2o. Rabat, Morocco: The International Center for Agricultural Research in the Dry Areas (ICARDA), April 5-7, 2017. p. 46.| Biblioteca(s): INIA La Estanzuela. |
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| 8. | | BORGES, A.; GONZÁLEZ-REYMUNDEZ, A.; ERNST, O.; CADENAZZI, M.; TERRA, J.A.; GUTIÉRREZ, L. Can spatial modeling substitute experimental design in agricultural experiments? Crop Science, 2018, v. 59, no. 1, p. 1-10. Article history: Accepted paper, posted 10/05/18. Published online December, 13. 2018.| Biblioteca(s): INIA Treinta y Tres. |
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| 9. | | LADO,B.; BATTENFIELD, S.; POLAND, J.; QUINCKE, M.; SILVA, P.; GUTIÉRREZ, L. Comparación de metodologías de predicción de cruzamientos para rendimiento en trigo. MV 14 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016 p. 287.| Biblioteca(s): INIA La Estanzuela. |
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| 10. | | GUTIERREZ, L.; BORGES, A.; QUERO, G.; GONZALEZ-REYMUNDEZ, A.; BERRO, I.; LADO, B.; CASTRO, A. Biostatistical tools for plant breeding in the genomics era. In: German, S.; Quincke, M.; Vázquez, D.; Castro, M.; Pereyra, S.; Silva, P.; García, A. (Eds.). Seminario Internacional "1914-2014: Un siglo de mejoramiento de trigo en La Estanzuela". Montevideo (UY): INIA, 2018. p.46-57. (INIA Serie Técnica; 241).| Biblioteca(s): INIA La Estanzuela. |
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| 11. | | GUTIÉRREZ, L.; BERBERIAN, N.; CAPETTINI, F.; GERMAN, S.; PEREYRA, S.; PÉREZ, C.; CASTRO, A. Disease resistance QTLs in barley germplasm from Latin America In: INTERNATIONAL ANIMAL AND PLANT GENOME CONFERENCE, 20., 2012, San Diego, CA, US. Posters: wheat, barley, oat, and related. P0350. [s.l.: INTL-PAG], 2012.| Biblioteca(s): INIA La Estanzuela. |
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| 12. | | CAJARVILLE, C.; BRITOS, A.; ERRANDONEA, N.; GUTIÉRREZ, L.; COZZOLINO, D.; REPETTO, J.L. Diurnal changes in water-soluble carbohydrate concentration in lucerne and tall fescue in autumn and the effects on in vitro fermentation. Research Article. New Zealand Journal of Agricultural Research, 2015, v. 58, no.3, p. 281-291. Article history: Received 23 January 2014 // Accepted 5 February 2015.| Biblioteca(s): INIA Las Brujas. |
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| 13. | | PORTA, B.; CONDON, F.; BONNECARRERE, V.; GUTIÉRREZ, L.; FRANCO, J.; GALVÁN, G. Diversidad y estructura genética del germoplasma de maíz blanco dentad de Uruguay mediante microsatélites. [Resumen]. In: SIMPÓSIO DE RECURSOS GENÉTICOS PARA A AMÉRICA LATINA E CARIBE, 10., 2015, Bento Gonçalves. Recursos genéticos no século 21: de Vavilov a Svalbard. Anais... [s.l.]: Sociedade Brasileira de Recursos Genéticos, 2015. p.65. Agradecimientos: Comisión Sectorial de Investigación Científica, CSIC - UdelaR, Uruguay.| Biblioteca(s): INIA Las Brujas. |
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| 14. | | QUERO, C.; FERNANDEZ, S.; BRANDARIZ, S.B.; SIMONDI, S.; GUTIÉRREZ, L. Herramientas de análisis y visualización genómica. MV 10 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 285| Biblioteca(s): INIA Las Brujas. |
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| 16. | | REBOLLO, I.; AGUILAR, I.; PÉREZ DE VIDA, F.; MOLINA, F.; GUTIÉRREZ, L.; ROSAS, J.E. Genotype by environment interaction characterization and its modeling with random regression to climatic variables in two rice breeding populations. Original article. Crop Science. 2023, Volume 63, Issue 4, Pages 2220-2240. https://doi.org/10.1002/csc2.21029 -- OPEN ACCESS. Article history: Received 21 November 2022, Accepted 10 May 2023, Published online 16 June 2023. -- Correspondence: Rosas, J.E.; INIA, Estación Experimental Treinta y Tres, Road 8 km 281, Treinta y Tres, Uruguay; email:jrosas@inia.org.uy...| Biblioteca(s): INIA Las Brujas. |
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| 18. | | BERBERIAN, N.; CASTRO, A.; CAPETTINI, F.; FROS, D.; GERMAN, S.; PEREYRA, S.; PEREZ, C.; GUTIÉRREZ, L. Modelos mixtos para la identificación de QTL para enfermedades en cebada a traves de mapeo asociativo. In: REUNIÓN CIENTIFICA DEL GRUPO ARGENTINO DE BIOMETRÍA, 16., 2011, Salta, AR. Libro de resúmenes: modelos lineales y generalizados mixtos. La Plata: GAB, 2011. p. 108.| Biblioteca(s): INIA La Estanzuela. |
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| 19. | | GONZÁLEZ BARRIOS, P.; PÉREZ, O.; CASTRO, M.; CERETTA, S.; VILARO, D.; GUTIÉRREZ, L. Identificación de limitantes a la expresión del potencial de rendimiento en girasol en Uruguay mediante GGE biplots y PLS regression. In: IV Encuentro Iberoamericano de Biometría; 4o. y XVIII Reunión Científica del GAB, 17o., Setiembre 2013, Mar del Plata ,ROMERO, M.C.; MARINELLI, C.; CEPEDA, R. Eds., La Plata, Bs As, Argentina: Grupo Argentino de Biometría. p. 236-239| Biblioteca(s): INIA La Estanzuela. |
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| Registros recuperados : 62 | |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha actual : |
14/09/2023 |
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Actualizado : |
14/09/2023 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
REBOLLO, I.; AGUILAR, I.; PÉREZ DE VIDA, F.; MOLINA, F.; GUTIÉRREZ, L.; ROSAS, J.E. |
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Afiliación : |
MARÍA INÉS REBOLLO PANUNCIO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Department of Statistics, University de la República, College of Agriculture, Garzón 780, Montevideo, Montevideo, Uruguay; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FERNANDO BLAS PEREZ DE VIDA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FEDERICO MOLINA CASELLA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LUCÍA GUTIÉRREZEPARTMENT OF STATISTICS, UNIVERSITY DE LA REPÚBLICA, COLLEGE OF AGRICULTURE, GARZÓN 780, MONTEVIDEO, MONTEVIDEO, URUGUAY DEPARTMENT OF AGRONOMY, UNIVERSITY OF WISCONSIN–MADISON, 1575 LINDEN DRIVE, MADISON, WI, UNITED STATES, Department of Statistics, University de la República, College of Agriculture, Montevideo, Uruguay; Department of Agronomy, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, United States; JUAN EDUARDO ROSAS CAISSIOLS, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Department of Statistics, University de la República, College of Agriculture, Garzón 780, Montevideo, Montevideo, Uruguay. |
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Título : |
Genotype by environment interaction characterization and its modeling with random regression to climatic variables in two rice breeding populations. |
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Complemento del título : |
Original article. |
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Fecha de publicación : |
2023 |
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Fuente / Imprenta : |
Crop Science. 2023, Volume 63, Issue 4, Pages 2220-2240. https://doi.org/10.1002/csc2.21029 -- OPEN ACCESS. |
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ISSN : |
0011-183X (print); 1435-0653 (electronic). |
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DOI : |
10.1002/csc2.21029 |
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Idioma : |
Inglés |
|
Notas : |
Article history: Received 21 November 2022, Accepted 10 May 2023, Published online 16 June 2023. -- Correspondence: Rosas, J.E.; INIA, Estación Experimental Treinta y Tres, Road 8 km 281, Treinta y Tres, Uruguay; email:jrosas@inia.org.uy -- FUNDING: Funding for this project was provided by Instituto Nacional de Investigación Agropecuaria (Projects AZ35, AZ13, and fellowship to I. R.), Agencia Nacional de Investigación Agropecuaria (grant MOV_CA_2019_1_156241), Comisión Sectorial de Investigación Científica, Universidad de la República (grant Iniciación a la Investgación 2019 No. 8), Comité Académico de Posgrado (fellowship to I. R.), and the Agriculture and Food Research Initiative Competitive Grant 2022-68013-36439 (WheatCAP) from the USDA National Institute of Food and Agriculture. -- LICENSE: This is an open access article under the terms of theCreative Commons Attribution-NonCommercial (http://creativecommons.org/licenses/by-nc/4.0/ ) |
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Contenido : |
ABSTRACT.- Genotype by environment interaction (GEI) is one of the main challenges in plant breeding. A complete characterization of it is necessary to decide on proper breeding strategies. Random regression models (RRMs) allow a genotype-specific response to each regressor factor. RRMs that include selected environmental variables represent a promising approach to deal with GEI in genomic prediction. They enable to predict for both tested and untested environments, but their utility in a plant breeding scenario remains to be shown. We used phenotypic, climatic, pedigree, and genomic data from two public subtropical rice (Oryza sativa L.) breeding programs; one manages the indica population and the other manages the japonica population. First, we characterized GEI for grain yield (GY) with a set of tools: variance component estimation, mega-environment (ME) definition, and correlation between locations, sowing periods, and MEs. Then, we identified the most influential climatic variables related to GY and its GEI and used them in RRMs for single-step genomic prediction. Finally, we evaluated the predictive ability of these models for GY prediction in tested and untested years and environments using the complete dataset and within each ME. Our results suggest large GEI in both populations while larger in indica than in japonica. In indica, early sowing periods showed crossover (i.e., rank-change) GEI with other sowing periods. Climatic variables related to temperature, radiation, wind, and precipitation affecting GY were identified and differed in each population. RRMs with selected climatic covariates improved the predictive ability in both tested and untested years and environments. Prediction using the complete dataset performed better than predicting within each ME. © 2023 The Authors. Crop Science © 2023 Crop Science Society of America. MenosABSTRACT.- Genotype by environment interaction (GEI) is one of the main challenges in plant breeding. A complete characterization of it is necessary to decide on proper breeding strategies. Random regression models (RRMs) allow a genotype-specific response to each regressor factor. RRMs that include selected environmental variables represent a promising approach to deal with GEI in genomic prediction. They enable to predict for both tested and untested environments, but their utility in a plant breeding scenario remains to be shown. We used phenotypic, climatic, pedigree, and genomic data from two public subtropical rice (Oryza sativa L.) breeding programs; one manages the indica population and the other manages the japonica population. First, we characterized GEI for grain yield (GY) with a set of tools: variance component estimation, mega-environment (ME) definition, and correlation between locations, sowing periods, and MEs. Then, we identified the most influential climatic variables related to GY and its GEI and used them in RRMs for single-step genomic prediction. Finally, we evaluated the predictive ability of these models for GY prediction in tested and untested years and environments using the complete dataset and within each ME. Our results suggest large GEI in both populations while larger in indica than in japonica. In indica, early sowing periods showed crossover (i.e., rank-change) GEI with other sowing periods. Climatic variables related to temperature, radiati... Presentar Todo |
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Palabras claves : |
Genotype by environment interaction (GEI); Random regression models (RRMs); Rice (Oryza sativa L.). |
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Asunto categoría : |
-- |
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URL : |
https://acsess.onlinelibrary.wiley.com/doi/epdf/10.1002/csc2.21029
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Marc : |
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100 1 $aREBOLLO, I.
245 $aGenotype by environment interaction characterization and its modeling with random regression to climatic variables in two rice breeding populations.$h[electronic resource]
260 $c2023
500 $aArticle history: Received 21 November 2022, Accepted 10 May 2023, Published online 16 June 2023. -- Correspondence: Rosas, J.E.; INIA, Estación Experimental Treinta y Tres, Road 8 km 281, Treinta y Tres, Uruguay; email:jrosas@inia.org.uy -- FUNDING: Funding for this project was provided by Instituto Nacional de Investigación Agropecuaria (Projects AZ35, AZ13, and fellowship to I. R.), Agencia Nacional de Investigación Agropecuaria (grant MOV_CA_2019_1_156241), Comisión Sectorial de Investigación Científica, Universidad de la República (grant Iniciación a la Investgación 2019 No. 8), Comité Académico de Posgrado (fellowship to I. R.), and the Agriculture and Food Research Initiative Competitive Grant 2022-68013-36439 (WheatCAP) from the USDA National Institute of Food and Agriculture. -- LICENSE: This is an open access article under the terms of theCreative Commons Attribution-NonCommercial (http://creativecommons.org/licenses/by-nc/4.0/ )
520 $aABSTRACT.- Genotype by environment interaction (GEI) is one of the main challenges in plant breeding. A complete characterization of it is necessary to decide on proper breeding strategies. Random regression models (RRMs) allow a genotype-specific response to each regressor factor. RRMs that include selected environmental variables represent a promising approach to deal with GEI in genomic prediction. They enable to predict for both tested and untested environments, but their utility in a plant breeding scenario remains to be shown. We used phenotypic, climatic, pedigree, and genomic data from two public subtropical rice (Oryza sativa L.) breeding programs; one manages the indica population and the other manages the japonica population. First, we characterized GEI for grain yield (GY) with a set of tools: variance component estimation, mega-environment (ME) definition, and correlation between locations, sowing periods, and MEs. Then, we identified the most influential climatic variables related to GY and its GEI and used them in RRMs for single-step genomic prediction. Finally, we evaluated the predictive ability of these models for GY prediction in tested and untested years and environments using the complete dataset and within each ME. Our results suggest large GEI in both populations while larger in indica than in japonica. In indica, early sowing periods showed crossover (i.e., rank-change) GEI with other sowing periods. Climatic variables related to temperature, radiation, wind, and precipitation affecting GY were identified and differed in each population. RRMs with selected climatic covariates improved the predictive ability in both tested and untested years and environments. Prediction using the complete dataset performed better than predicting within each ME. © 2023 The Authors. Crop Science © 2023 Crop Science Society of America.
653 $aGenotype by environment interaction (GEI)
653 $aRandom regression models (RRMs)
653 $aRice (Oryza sativa L.)
700 1 $aAGUILAR, I.
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700 1 $aGUTIÉRREZ, L.
700 1 $aROSAS, J.E.
773 $tCrop Science. 2023, Volume 63, Issue 4, Pages 2220-2240. https://doi.org/10.1002/csc2.21029 -- OPEN ACCESS.
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